BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030G04LP1|AL429272
(920 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1138 1780 0.0
>3x_Contig1138
Length = 5524
Score = 1780 bits (896), Expect = 0.0
Identities = 916/922 (99%), Gaps = 2/922 (0%)
Strand = Plus / Minus
Query: 1 ctttagcgaaattccwtaagaagacgaa-ttgcaacctcaaagagatactttgaagcaat 59
|||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2757 ctttagcgaaataccataagaagacgaagttgcaacctcaaagagatactttgaagcaat 2698
Query: 60 tagaygagtttggtagaagtttggccatcggaagaagaaagacctctactgccaaggtat 119
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2697 tagacgagtttggtagaagtttggccatcggaagaagaaagacctctactgccaaggtat 2638
Query: 120 atgtggttcgtggtgaaggtaagatcttagttaacgaccgtcaattaaacgattacttcg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2637 atgtggttcgtggtgaaggtaagatcttagttaacgaccgtcaattaaacgattacttcg 2578
Query: 180 ttaaaatgaaggacagagaatccgtaatgtatccattaaaagccattgacagtgttggca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2577 ttaaaatgaaggacagagaatccgtaatgtatccattaaaagccattgacagtgttggca 2518
Query: 240 aatataacgtctttgcaatggtttccggaggtggtattacggggcaagccgatgccttga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2517 aatataacgtctttgcaatggtttccggaggtggtattacggggcaagccgatgccttga 2458
Query: 300 tgcatgcaatcggtaaggcattggttgctttcaacccactattgaaaactagattgcata 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2457 tgcatgcaatcggtaaggcattggttgctttcaacccactattgaaaactagattgcata 2398
Query: 360 gatccggtgtcttgacaagagattacagacacgtcgaaagaaagaagcctggtaagagaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2397 gatccggtgtcttgacaagagattacagacacgtcgaaagaaagaagcctggtaagagaa 2338
Query: 420 aggcaagaaagatgcctacctgggttaagcgttgatctgatattagtctctgacctttcc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2337 aggcaagaaagatgcctacctgggttaagcgttgatctgatattagtctctgacctttcc 2278
Query: 480 attaaaaaaaacacatgcttgtttcacaagtcctgtacatatatagcaattttacataat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2277 attaaaaaaaacacatgcttgtttcacaagtcctgtacatatatagcaattttacataat 2218
Query: 540 ttaacaagctcctttcaccttttactctgtcgtcctacgttagcatctcgtagttccatt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2217 ttaacaagctcctttcaccttttactctgtcgtcctacgttagcatctcgtagttccatt 2158
Query: 600 agtcgtagtttcaaaaaatcttgtagatccttgttcttccttgttcgtagtaacatatct 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2157 agtcgtagtttcaaaaaatcttgtagatccttgttcttccttgttcgtagtaacatatct 2098
Query: 660 tcagacgtaacaacatttctgttagcatgttgggcaaaagcttccaaatcaccaccaacc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2097 tcagacgtaacaacatttctgttagcatgttgggcaaaagcttccaaatcaccaccaacc 2038
Query: 720 tcacatatctgctggtaaaccagttcagtaagagtgttgacatattttgaattgtatttt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2037 tcacatatctgctggtaaaccagttcagtaagagtgttgacatattttgaattgtatttt 1978
Query: 780 acatcttctggtagttctcttttgataatcgattccacatagaaccacagcttcccgcgt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1977 acatcttctggtagttctcttttgataatcgattccacatagaaccacagcttcccgcgt 1918
Query: 840 aactgggatcgtaatctcttctcttcatccatatttgatcaactgaacgacgctamcatg 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1917 aactgggatcgtaatctcttctcttcatccatatttgatcaactgaacgacgctaccatg 1858
Query: 900 aatagag-ccacaggacaatgc 920
||||||| ||||||||||||||
Sbjct: 1857 aatagagcccacaggacaatgc 1836
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6896
Number of Sequences: 1807
Number of extensions: 6896
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 920
length of database: 10,358,551
effective HSP length: 16
effective length of query: 904
effective length of database: 10,329,639
effective search space: 9337993656
effective search space used: 9337993656
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)